Types of Literature Reviews

Overview of a Literature Review

A literature review is a generic term used to describe a synthesis of information to answer a research question. The purpose of a literature review is to present the scholarly information that is available on a topic, provide support to the proposed research, and relate the literature to the proposed research question. There are numerous types of literature reviews. These vary from a narrative review to a systematic review.

Review types differ by:

      • the precision of the research question (broad to specific)
      • the goal of the review
      • the standards of the searching method
      • if the articles are appraised
      • how information from various sources is synthesized
      • the analysis of the results
      • showing the current state of the literature around a particular topic

The IHS Library offers assistance How to Write a Literature Review.

 

Types of Literature Reviews

Literature or Narrative Review

    • Team: May be completed by a single author
    • Definition: Generic term: A synthesis of current literature surrounding a specific topic. The purpose of a narrative review is to provide background information on the topic, support the proposed research and/or answer a research question.
    • Search Methods: Non-specific; Author chooses relevant articles based on research question.
    • Appraisal: Determined by the author
    • Synthesis: Narrative
    • Analysis: Chronological, conceptual, thematic, etc.

 Scoping or Mapping Review

    • Team: Requires a minimum of 2 authors
    • Definition: Preliminary assessment of potential size and scope of available research literature on a broad topic. Aims to identify nature and extent of research evidence. Includes grey literature, preprints and ongoing studies. Scoping reviews are conducted based upon the JBI manual of evidence synthesis.
    • Search Methods: Broad scope of literature available. Search methods must be transparent and reproducible. Search strategies are peer reviewed & documented in full.
    • Appraisal: All evidence is independently screened by 2 reviewers to ensure evidence meets the inclusion criteria. The critical appraisal process is optional but recommended
    • Synthesis: Narrative
    • Analysis: Characterizes quantity and quality of literature based upon the elements of the PCC research question and the inclusion/exclusion criteria

Systematic Review

    • Team: (Requires a minimum of 2 authors)
    • Definition: Seeks to systematically search for, appraise and synthesize all available research evidence on the topic. SRs answer a specific research question and are conducted based upon the JBI manual of evidence synthesis.
    • Search Methods: Exhaustive, comprehensive, & systematic search. Search methods must be transparent & reproducible. Search strategies are peer reviewed & well documented.
    • Appraisal: All evidence is independently screened by 2 reviewers to meet inclusion criteria and critically appraised using the JBI Critical Appraisal Checklists
    • Synthesis: Narrative
    • Analysis: Synthesizes what is known within the existing literature. Highlights what is unknown and recommends future research.
  • Umbrella Review
    • Team: (Requires a minimum of 2 authors)
    • Definition: Reviews the results of multiple systematic reviews on a specific topic. All reviews must analyze a shared methodology, facilitating comparison and analysis. Umbrella reviews are conducted based upon the JBI manual of evidence synthesis
    • Search Methods: Exhaustive, comprehensive & systematic search of reviews. Does not include primary studies. Search methods must be transparent, reproducible, and well documented.
    • Appraisal: All evidence is independently screened by 2 reviewers to meet inclusion criteria and critically appraised using the JBI Critical Appraisal Checklists
    • Synthesis: Graphical and tabular with narrative commentary
    • Analysis: What is known; Recommendations for practice. What remains unknown; recommendations for future research

Rapid Review

    • Team: Requires a minimum of 2 authors
    • Definition: Assessment of what is already known about a policy or practice issue, by using systematic review methods to search and critically appraise existing research. RRs are conducted according to the JBI manual of evidence synthesis
    • Search Methods: Completeness of searching determined by time constraints. All search strategies must be transparent, reproducible, and documented
    • Appraisal: Time-limited formal quality assessment.
    • All evidence is independently screened by 2 reviewers to meet inclusion criteria
    • Synthesis: Narrative and tabular
    • Analysis: Quantities of literature and overall quality/direction of effect of literature

Meta Analysis

    • Definition: Statistical analysis of quantitative evidence provided within a Systematic Review.
    • Team: Interdisciplinary
    • Meta-analysis are conducted according to the JBI manual of evidence synthesis
    • Search Methods: Exhaustive, comprehensive & systematic search of reviews. Does not include primary studies. Search methods must be transparent, reproducible and documented.
    • Appraisal: All evidence has been critically appraised in the systematic review
    • Synthesis: Graphical representation in a Forest plot.
    • Analysis: Numerical analysis of measures of effect assuming absence of heterogeneity

 

Reproduced from Grant, M. J. and Booth, A. (2009), A typology of reviews: an analysis of 14 review types and associated methodologies. Health Information & Libraries Journal, 26: 91–108. doi:10.1111/j.1471-1842.2009.00848.x

Terlecky’s Corner: Sickle Cell & Gene Therapy

Terlecky’s Corner: Installment 12

Gene Therapy for Sickle Cell Anemia: Repairing Hemoglobin Subunit Assembly

This month’s announcement[1] from the Food and Drug Administration (FDA) that it will approve two therapeutic approaches to address the molecular defects associated with sickle cell anemia is a major step forward not only in terms of treatment of the disease, but also as evidence of how far the science of gene editing has come.

Sickle cellSickle cell anemia is an inherited blood-borne disease affecting some 100,000 individuals in the US, and nearly 8 million worldwide. Persons of sub-Saharan African descent appear to manifest the disease to the greatest extent, with those of Indian, Hispanic, or Middle Eastern backgrounds also highly affected. The pathology is devastating – misshapen red blood cells occlude blood vessels, compromising flow and inhibiting oxygen delivery. Pain develops frequently in oxygen-deprived tissues. Other complications include an enhanced susceptibility to infections, various eye problems, organ damage, and increased risks of pulmonary/heart disease and stroke.

At the molecular level – sickle cell anemia (in its most common form) is the result of a faulty hemoglobin protein inside red blood cells. Hemoglobin – the vehicle for oxygen delivery in our bodies – is composed of four subunits, two alpha- and two beta-globin proteins, with each complexing an iron-containing heme prosthetic group. Hemoglobin is a marvel of protein biochemistry – a paradigm for allosteric (in this case, oxygen-binding) cooperativity. That is, when the first oxygen molecule binds to hemoglobin, binding of the second oxygen is “cooperatively” enhanced; and similarly for oxygen additions three and four. The fully loaded hemoglobin then leaves the lungs and travels through the blood to tissues whereupon oxygen is released. This is the normal circumstance.

In sickle cell anemia, amino acid 6 of the beta-globin subunit is altered – from glutamic acid to valine. Any protein biochemist will readily recognize that such a substitution (charged reside to hydrophobic one) could dramatically change the molecules folding and/or functional properties. Such is the case with the beta-globin protein – which now interacts inappropriately with other (beta-globin) subunits by virtue of the newly exposed (hydrophobic) surface. As a result, hemoglobin’s tertiary (that is, folded) structure is altered. Indeed, the misshapen hemoglobin molecule aberrantly polymerizes and forms long fibers with the resultant deformed (~sickle shaped) red blood cells causing the aforementioned vaso-occlusive manifestations.

To best understand the genetic strategies employed in the newly approved therapies, some mention of fetal hemoglobin is warranted. Fetal hemoglobin, like the adult version, is a tetrameric protein – with two alpha-subunits – which are complexed with two gamma-, not beta-globin subunits. Shortly after birth, a switch occurs – gamma-globin synthesis is reduced and beta-globin’s turned on. Beta-globin now replaces gamma-globin in complexing with alpha-globin chains to create the adult hemoglobin molecule.

Interestingly, some patients with sickle cell disease continue to make fetal hemoglobin, and enjoy a milder disease course. In fact, the previously FDA-approved drug hydroxyurea, which helps boost fetal hemoglobin levels, has shown efficacy in treating the disease. (On the down side, concerns about toxicity and uneven effectiveness across patient populations have limited hyroxyurea’s more universal adoption.) Nevertheless, the anti-sickling properties of fetal hemoglobin’s gamma-globin chain have been recognized.

Scientists compared gamma-globin to beta-globin and tested variously altered beta-globin derivatives that would confer gamma-globin’s anti-sickling property. One such alteration is a threonine to glutamine change at position 76. It is lentivirus-mediated expression of beta-globin(T76Q) into hematopoietic stems cells that constitutes the basis of Bluebird Bio’s Lyfgenia® (lovotibeglogene autotemcel) therapy – approved by the FDA on December 8th. The idea is that the non-sickling beta-globin(T76Q) subunits will complex with alpha-subunits (and heme prosthetic groups) and result in a fully functional hemoglobin molecule.

Casgevy® (exagamglogene autotemcel) from Vertex Pharmaceuticals takes a different approach. It employs the CRISPR/Cas9 (gene editing) system to eliminate production of a protein called B-cell lymphoma/leukemia 11A (BCL11A). BCL11A is an enzyme which induces the switch in humans – shifting expression from gamma-globin to beta-globin. As described above, this occurs during human development – specifically at birth. As the strategy will result in (non-sickling) gamma-globin production – once again functional hemoglobin will be produced.

To varying degrees, both strategies appear to work – hence the FDA’s approval. There is risk – as the intricate therapeutic approaches require: i. removal of hematopoietic stem cells; ii. the genetic alterations as outlined; iii. conditioning of the patient for receipt of the genetically engineered replacement cells; and iv. the cells’ reintroduction. Also, as might be expected from the complex nature of the steps involved, even as one-time therapies, they are both extremely expensive. That said, how can a price be placed on enjoying even modest relief from the pain and suffering associated with sickle-cell disease?

SRT – December 2023

[1] https://www.fda.gov/news-events/press-announcements/fda-approves-first-gene-therapies-treat-patients-sickle-cell-disease